Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (2024)

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (1) https://doi.org/10.1099/ijs.0.02765-0 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (2) Повний текст

Видання: International Journal of Systematic and Evolutionary Microbiology, 2004, №3, с.929-933

Видавець: Microbiology Society

Автори: Jung-Sook Lee, Yu-Ryang Pyun, Kyung Sook Bae

Анотація

The taxonomic status of Bacillus ehimensis and Bacillus chitinolyticus was examined, based on their 16S rDNA sequences, DNA–DNA hybridization and other taxonomic characteristics. A phylogenetic analysis using 16S rDNA sequences revealed that the two species belong to the genus Paenibacillus. In particular, B. ehimensis KCTC 3748T and B. chitinolyticus KCTC 3791T were found to be phylogenetically closely related to Paenibacillus koreensis YC300T (98·3 % sequence similarity) and Paenibacillus chinjuensis WN9T (95·2 % sequence similarity), respectively. DNA–DNA hybridization values between B. ehimensis KCTC 3748T and P. koreensis YC300T were less than 26 %. An experiment using Paenibacillus-specific PCR primers, PAEN515F and 1377R, revealed that B. ehimensis and B. chitinolyticus had the same amplified 16S rDNA fragment as members of the genus Paenibacillus. Accordingly, it is proposed that B. ehimensis and B. chitinolyticus be transferred to the genus Paenibacillus as Paenibacillus ehimensis comb. nov. and Paenibacillus chitinolyticus comb. nov., respectively.

Список літератури

  1. Ash, Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks, and Collins) using a PCR probe test. Proposal for the creation of a new genus Paenibacillus, Antonie van Leeuwenhoek, № 64, с. 253
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (3) https://doi.org/10.1007/BF00873085
  2. Chung, Paenibacillus koreensis sp. nov., a new species that produces an iturin-like antifungal compound, Int J Syst Evol Microbiol, № 50, с. 1495
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (4) https://doi.org/10.1099/00207713-50-4-1495
  3. Danne, PAH-degradation by Paenibacillus spp. and description of Paenibacillus naphthalenovorans sp. nov., a naphthalene-degrading bacterium from the rhizosphere of salt marsh plants, Int J Syst Evol Microbiol, № 52, с. 131
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (5) https://doi.org/10.1099/00207713-52-1-131
  4. Felsenstein, phylip (phylogeny inference package), version 3.5c
  5. Heyndrickx, Paenibacillus (formerly Bacillus ) gordonae (Pichinoty et al . 1986) Ash et al . 1994 is a later subjective synonym of Paenibacillus (formerly Bacillus ) validus (Nakamura 1984, Ash et al . 1994: emended description of P. validus, Int J Syst Bacteriol, № 45, с. 661
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (6) https://doi.org/10.1099/00207713-45-4-661
  6. Heyndrickx, Reclassification of Paenibacillus (formerly Bacillus ) pulvifaciens (Nakamura 1966) Ash et al . 1994, a later subjective synonym ofPaenibacillus (formerly Bacillus ) larvae (White 1984) Ash et al . 1994, as a subspecies of P. larvae , with emended description of P. larvae as P.larvae subsp. larvae and P. larvae subsp. pulvifaciens, Int J Syst Bacteriol, № 46, с. 270
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (7) https://doi.org/10.1099/00207713-46-1-270
  7. Jukes, Evolution of protein molecules, In Mammalian Protein Metabolism, с. 21
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (8) https://doi.org/10.1016/B978-1-4832-3211-9.50009-7
  8. Kuroshima, Bacillus ehimensis sp. nov. and Bacillus chitinolyticus sp. nov., new chitinolytic members of the genus Bacillus, Int J Syst Bacteriol, № 46, с. 76
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (9) https://doi.org/10.1099/00207713-46-1-76
  9. Lee, Identification of lactic acid bacteria from kimchi by cellular FAMEs analysis, Kor J Appl Microbiol Biotechnol, № 24, с. 234
  10. Nakamura, Bacillus amylolyticus sp. nov., nom. rev., Bacillus lautus sp. nov., nom. rev., Bacillus pabuli sp. nov., nom. rev., and Bacillus validus sp. nov., nom. rev., Int J Syst Bacteriol 3, № 4, с. 224
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (10) https://doi.org/10.1099/00207713-34-2-224
  11. Nakamura, Bacillus alginolyticus sp. nov. and Bacillus chondroitinus sp. nov., two alginate-degrading species, Int J Syst Bacteriol, № 37, с. 284
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (11) https://doi.org/10.1099/00207713-37-3-284
  12. Saitou, The neighbor-joining method: a new method for reconstructing phylogenetic trees, Mol Biol Evol, № 4, с. 406
  13. Shida, Transfer of Bacillus alginolyticus , Bacillus chondroitinus , Bacillus curdlanolyticus , Bacillus glucanolyticus , Bacillus kobensis , and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus, Int J Syst Bacteriol, № 47, с. 289
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (12) https://doi.org/10.1099/00207713-47-2-289
  14. Stackebrandt, Taxonomic note: a place for DNA–DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology, Int J Syst Bacteriol, № 44, с. 846
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (13) https://doi.org/10.1099/00207713-44-4-846
  15. Stackebrandt, Nucleic acids and classification, In Handbook of New Bacterial Systematics, с. 152
  16. Thompson, clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res, № 22, с. 4673
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (14) https://doi.org/10.1093/nar/22.22.4673
  17. Wayne, International Committee on Systematic Bacteriology. Report of the ad hoc Committee on Reconciliation of Approaches to Bacterial Systematics, Int J Syst Bacteriol, № 37, с. 463
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (15) https://doi.org/10.1099/00207713-37-4-463
  18. Yang, Application of fatty acid methyl esters for the taxonomic analysis of the genus Xanthom*onas, Syst Appl Microbiol, № 16, с. 47
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (16) https://doi.org/10.1016/S0723-2020(11)80250-X
  19. Yoon, Paenibacillus chinjuensis sp. nov., a novel exopolysaccharide-producing bacterium, Int J Syst Evol Microbiol, № 52, с. 415
    Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (17) https://doi.org/10.1099/00207713-52-2-415

Публікації, які цитують цю публікацію

Paenibacillus oleatilyticus sp. nov., isolated from soil

Nar Singh Chauhan, Neetha Joseph, Shraddha Shaligram, Nikita Chavan, Amaraja Joshi, Dhiraj Dhotre, Tushar Lodha, Yogesh Shouche

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (18) https://doi.org/10.1007/s00203-022-03116-0

2022, Archives of Microbiology, №8

Scopus

WoS

Цитувань Crossref:0

The study of mycolytic properties of aerobic spore-forming bacteria producing extracellular chitinases

G. E. Aktuganov, A. I. Melent’ev, N. F. Galimzyanova, A. V. Shirokov

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (19) https://doi.org/10.1134/s0026261708060088

2008, Microbiology, №6, с.700-709

Scopus

WoS

Цитувань Crossref:6

Newly Isolated Paenibacillus tyrfis sp. nov., from Malaysian Tropical Peat Swamp Soil with Broad Spectrum Antimicrobial Activity

Yoong-Kit Aw, Kuan-Shion Ong, Learn-Han Lee, Yuen-Lin Cheow, Catherine M. Yule, Sui-Mae Lee

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (20) https://doi.org/10.3389/fmicb.2016.00219 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (21) Повний текст

2016, Frontiers in Microbiology

Scopus

WoS

Цитувань Crossref:21

Paenibacillus contaminans sp. nov., isolated from a contaminated laboratory plate

J.-H. Chou, J.-H. Lee, M.-C. Lin, P.-S. Chang, A. B. Arun, C.-C. Young, W.-M. Chen

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (22) https://doi.org/10.1099/ijs.0.001495-0 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (23) Повний текст

2009, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, №1, с.125-129

Scopus

WoS

Цитувань Crossref:14

Paenibacillus swuensis sp. nov., a bacterium isolated from soil

Jae-Jin Lee, Da-Hye Yang, Ye-Sil Ko, Jae-Kyoung Park, Eun-Young Im, Ju-Yeon Kim, Ka-Young Kwon, Yu-Jung Lee, Hyung-Mi Kim, Myung Kyum Kim

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (24) https://doi.org/10.1007/s12275-014-3546-x

2014, Journal of Microbiology, №2, с.106-110

Scopus

WoS

Цитувань Crossref:10

Paenibacillus gansuensis sp. nov., isolated from desert soil of Gansu Province in China

Jee-Min Lim, Che Ok Jeon, Jae-Chan Lee, Li-Hua Xu, Cheng-Lin Jiang, Chang-Jin Kim

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (25) https://doi.org/10.1099/ijs.0.64210-0 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (26) Повний текст

2006, International Journal of Systematic and Evolutionary Microbiology, №9, с.2131-2134

Scopus

WoS

Цитувань Crossref:27

Paenibacillus ginsengihumi sp. nov., a bacterium isolated from soil in a ginseng field

M. K. Kim, Y.-A. Kim, M.-J. Park, D.-C. Yang

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (27) https://doi.org/10.1099/ijs.0.65378-0 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (28) Повний текст

2008, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, №5, с.1164-1168

Scopus

WoS

Цитувань Crossref:9

Paenibacillus elgii sp. nov., with broad antimicrobial activity

Dal-Soo Kim, Cheol-Yong Bae, Jae-Jin Jeon, Sam-Jae Chun, Hyun Woo Oh, Soon Gyu Hong, Keun-Sik Baek, Eun Young Moon, Kyung Sook Bae

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (29) https://doi.org/10.1099/ijs.0.02414-0 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (30) Повний текст

2004, International Journal of Systematic and Evolutionary Microbiology, №6, с.2031-2035

Scopus

WoS

Цитувань Crossref:40

Ecological Functions of Agricultural Soil Bacteria and Microeukaryotes in Chitin Degradation: A Case Study

Adam S. Wieczorek, Oliver Schmidt, Antonis Chatzinotas, Martin von Bergen, Antonie Gorissen, Steffen Kolb

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (31) https://doi.org/10.3389/fmicb.2019.01293 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (32) Повний текст

2019, Frontiers in Microbiology

Scopus

WoS

Цитувань Crossref:42

Paenibacillus lutrae sp. nov., A Chitinolytic Species Isolated from A River Otter in Castril Natural Park, Granada, Spain

Miguel Rodríguez, José Carlos Reina, Victoria Béjar, Inmaculada Llamas

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (33) https://doi.org/10.3390/microorganisms7120637 · Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (34)

2019, Microorganisms, №12, с.637

Scopus

WoS

Цитувань Crossref:2

Знайти всі цитування публікації

Transfer of Bacillus ehimensis and Bacillus chitinolyticus to the genus Paenibacillus with emended descriptions of Paen… (2024)

References

Top Articles
Case IH Farmall 55 A gebraucht & neu kaufen
Edgenuity Unit Test: Comprehensive Overview on Student’s Guide - English Summa
Kmart near me - Perth, WA
My Arkansas Copa
Dannys U Pull - Self-Service Automotive Recycling
Sound Of Freedom Showtimes Near Governor's Crossing Stadium 14
Rek Funerals
Seething Storm 5E
Bank Of America Appointments Near Me
Steve Strange - From Punk To New Romantic
Roblox Character Added
Comenity Credit Card Guide 2024: Things To Know And Alternatives
Delectable Birthday Dyes
Chastity Brainwash
Turbocharged Cars
Detroit Lions 50 50
Https://Gw.mybeacon.its.state.nc.us/App
Jasmine Put A Ring On It Age
Summoners War Update Notes
Jack Daniels Pop Tarts
Hair Love Salon Bradley Beach
Mills and Main Street Tour
Hell's Kitchen Valley Center Photos Menu
Lancasterfire Live Incidents
Tvtv.us Duluth Mn
Td Small Business Banking Login
Kashchey Vodka
eHerkenning (eID) | KPN Zakelijk
Best Boston Pizza Places
Pawn Shop Moline Il
Select Truck Greensboro
From This Corner - Chief Glen Brock: A Shawnee Thinker
JVID Rina sauce set1
Bolly2Tolly Maari 2
The Fabelmans Showtimes Near Baton Rouge
Duke University Transcript Request
Uncovering the Enigmatic Trish Stratus: From Net Worth to Personal Life
Noaa Marine Forecast Florida By Zone
Gus Floribama Shore Drugs
Vlocity Clm
Deleted app while troubleshooting recent outage, can I get my devices back?
Upstate Ny Craigslist Pets
Marine Forecast Sandy Hook To Manasquan Inlet
Ni Hao Kai Lan Rule 34
Powerspec G512
Today's Gas Price At Buc-Ee's
Wal-Mart 2516 Directory
Leena Snoubar Net Worth
The Wait Odotus 2021 Watch Online Free
VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium
Wvu Workday
Dinargurus
Latest Posts
Article information

Author: Msgr. Benton Quitzon

Last Updated:

Views: 6336

Rating: 4.2 / 5 (43 voted)

Reviews: 82% of readers found this page helpful

Author information

Name: Msgr. Benton Quitzon

Birthday: 2001-08-13

Address: 96487 Kris Cliff, Teresiafurt, WI 95201

Phone: +9418513585781

Job: Senior Designer

Hobby: Calligraphy, Rowing, Vacation, Geocaching, Web surfing, Electronics, Electronics

Introduction: My name is Msgr. Benton Quitzon, I am a comfortable, charming, thankful, happy, adventurous, handsome, precious person who loves writing and wants to share my knowledge and understanding with you.